NIFS-483

FULL TEXT (PDF, 2961 KB)


Author(s):

S. Fujiwara and T. Sato

Title:

Molecular Dynamics Simulations of Structural Formation of a Single Polymer Chain: Bond-orientational Order and Conformational Defects

Date of publication:

Feb. 1997

Key words:

molecular dynamics simulation, polymer chain,structural formation,bond-orientational order, conformational defect

Abstract:

The structural formation of a single polymer chain with 500 CH_2 groups is studied by the molecular dynamics simulations. Our simulations show that the bond-orientationally ordered structure at low temperatures is formed from a random-coil structure at high temperatures by a gradual stepwise cooling. From the radii of gyration and the bond-orientational order parameters, it is found that the anisotropy of a polymer chain also grows during the growth of the bond-orientational order. In the bond-orientationally ordered structure at low temperatures, 16 stems form a structure with deformed hexagonal symmetry and the stems in the outer layer have a tilted conflguration. Furthermore, the gauche states are localized in the fold surface and the conformational states in the fold surface change more readily than those in the orientationally-ordered region.

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